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PhD Programme in Biology

Available research topics:

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Hematology meets Immunology: erythrocyte-platelet-leukocyte interactions in the course of inflammatory disorders

Supervisor: prof. dr hab. Elżbieta Kołaczkowska (ela.kolaczkowska@uj.edu.pl)

Institute of Zoology and Biomedical Research


Background information:

Non-immune blood cells are hardly studied in the context of their immune-related functions but recently platelets and red blood cells (RBCs or erythrocytes) are more often acknowledged to be engaged in such activities. The project will focus on investigating erythrocyte-platelet-leukocyte interactions in situ in blood vessels of mice by application of intravital microscopy.

The main question to be addressed in the project:

What surface and/or secretory molecules are required for the above interactions, what is the outcome of such contacts, how can be manipulate them (pharmacologically or genetically) to impact the course of inflammation?

Information on the methods/description of work:

Intravital (in vivo) microscopy, confocal microscopy, large-scale studies on mouse models, Western blot, ELISA, immunocytochemistry, ex vivo cell culture (siRNA silencing, miRNA).

Additional information: (eg. Special requirements for the student)

experience in working with mice and confocal microscopy, ability to use the above mentioned methods, knowledge of English in speech and writing, openness to learning, teamwork skills.

Place/name of potential foreign collaborator:

Belgium, Canada

References:

[1] Kolaczkowska E, Jenne CN, Surewaard BG, Thanabalasuriar A, Lee WY, Sanz MJ, Mowen K, Opdenakker G, Kubes P. Molecular mechanisms of NET formation and degradation revealed by intravital imaging in the liver vasculature. Nat Commun. 2015;6:6673.

[2] Anderson HL, Brodsky IE, Mangalmurti NS. The Evolving Erythrocyte: Red Blood Cells as Modulators of Innate Immunity. J Immunol. 2018;201:1343.

[3] Ortmann W, Such A, Cichon I, Baj-Krzyworzeka M, Weglarczyk K, Kolaczkowska E. Large extracellular vesicle (EV) and neutrophil extracellular trap (NET) interaction captured in vivo during systemic inflammation. Sci Rep 2024;14;4680

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PhD Programme in Biology

Admission to the PhD Programme in Biology
in the Doctoral School of Exact and Natural Sciences
language of education: English

The PhD Programme in Biology is carried out in English, in a full-time, eight-semester system. 

This PhD programme covers courses representing various areas of biological sciences, including training in modern methodology and mastering skills useful in professional academic and non-academic careers. Choice of facultative classes and the possibility of gaining credits for courses offered outside of the University ensures flexibility and helps to adjust participation in courses to the individual research plan of the student. 

For everyone who will be accepted for the PhD programme in Biology, a scholarship is guaranteed.

PhD students are recruited for the specific research topics offered by the faculty members. We kindly ask you to follow the recruitment rules described in each competition. 

Each year, PhD students and their advisors/promotors write an individual research plan for a given year. Until the end of four semesters, students’ achievements are evaluated (mid-term evaluation) by the committee. 

Doctoral dissertations are prepared under the supervision of a scientific staff of the Faculty of Biology (members of the Institute of Botany, Institute of Environmental Sciences or Institute of Zoology and Biomedical Research). PhD programme in Biology leads to the scientific Doctoral title in the discipline of biology. More information about the programme can be found here.

See also:

Faculty of Biology website.
A subpage dedicated to this education programme.

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How to apply?

  1. Check the admissions schedule.
  2. Read the rules and detailed conditions of admission.
  3. Collect the required documents.
  4. Apply in the Online Application System (IRK).
  5. Take the exam.
  6. Make an enrolment in the Doctoral School.

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Admission schedule

for PhD Programme in Biology education programme

1st round

  • 21. May 2024 – Opening of registration in IRK System
  • 23. June 2024 – Closing of registration in IRK System
  • 28. June- 4 lipca 2024 – Entrance exams
  • 4. July 2024 – Committee meeting 
  • 8. July 2024 – Announcement of results
  • 9-30. July 2024 – Enrollment to the Doctoral School*
  • 31. July 2024 – Enrolment in the Doctoral School from the reserve list*

*enrollment possible during working hours of Secretariats of the Education Programmes

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Admission limits

  • 1st round – 10 doctoral students

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Contact

Secretariat of the Education Programme

mgr inż. Anna Stec

tel.: (0048) 12 664 6752
e-mail: wb.doktoranci@uj.edu.pl

Head of the Education Programme

dr hab. Joanna Kapusta, prof. UJ

tel.: (0048) 12 664 5206
e-mail: joanna.kapusta@uj.edu.pl

 

 

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The information presented on this subpage applies to admission for the academic year 2024/25. Documents such as admission rules, list of required documents, education programme and others may change in the next admission. Most documents differ for each education programme. Always check the documents on the sub-page of the programme to which you are applying.