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>> PhD Programme in Biology <<

>> PhD Programme in Biology [Academic year: 2023/2024] << [EN version will be published soon]

The PhD Programme in Biology is carried out in English, in a full-time, eight-semester system. 

This PhD programme covers courses representing various areas of biological sciences, including training in modern methodology and mastering skills useful in professional academic and non-academic careers. Choice of facultative classes and the possibility of gaining credits for courses offered outside of the University ensures flexibility and helps to adjust participation in courses to the individual research plan of the student. 

For everyone who will be accepted for the PhD programme in Biology, a scholarship is guaranteed.

PhD students are recruited for the specific research topics offered by the faculty members. Some of the competitions listed below are held outside the OAS system (Online Application System). We kindly ask you to follow the recruitment rules described in each competition. 

Each year, PhD students and their advisors/promotors write an individual research plan for a given year. Until the end of four semesters, students’ achievements are evaluated (mid-term evaluation) by the committee. 

Doctoral dissertations are prepared under the supervision of a scientific staff of the Faculty of Biology (members of the Institute of Botany, Institute of Environmental Sciences or Institute of Zoology and Biomedical Research). PhD programme in Biology leads to the scientific Doctoral title in the discipline of biology. More information about the programme can be found here.

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Home, sweet home: unravelling the determinants of tardigrade communities

Supervisor: dr hab. Łukasz Michalczyk, prof. UJ (l.michalczyk@uj.edu.pl)

Institute of Zoology and Biomedical Research


Background information:

Despite an increasing interest in studying tardigrades, our understanding of their ecological preferences is extremely limited. This is mostly due to the fact that the bulk of our knowledge on tardigrades comes from fragmentary, opportunistic sampling rather than from large-scale, systematic research expeditions and, even more rarely, from replicated sampling of the same communities over extended periods of time. Moreover, the scarce literature data on tardigrade ecology are based solely on classical taxonomy, which we now know can be extremely inaccurate in determining micrometazoan species diversity, rendering ecological inference unreliable. Importantly, without pinpointing the factors that determine microhabitat preferences of tardigrades, our understanding of the biology and evolution of this phylum will not be possible. This project offers an opportunity not only to fill this considerable knowledge gap but also to test a hypothesis on the co-evolution of tardigrades and cryptogams, as well as to increase sampling efficiency by limiting the number of target cryptogam species.

The main question to be addressed in the project:

The primary objective of this project is to determine abiotic and biotic factors shaping communities of cryptogam-dwelling tardigrades. Moreover, the data will allow for testing a hypothesis that the evolutionary history of tardigrade species, which exhibit clear habitat preferences, should overlap with the phylogeny of the inhabited cryptogams.

Information on the methods/description of work:

Samples will be collected from locations along altitude gradients to provide variation in climate variables. In addition to temperature and sun exposure, cryptogams will be analysed for their physicochemical properties, such as pH, desiccation rate, and compaction (which are all predicted to affect tardigrade survival and reproductive success). Moreover, cryptogam habitats will be controlled for the composition of the cohabitant microfauna which may affect tardigrade community (e.g., via predation or competition). All organisms (tardigrades, cryptogams, and other micrometazoans) will be barcoded (via NGS) to obtain MOTUs (and species identifications wherever possible).

Additional information (e.g Special requirements from the student):

The project involves both intense fieldwork and laboratory work. Thus, apart from an interest in microfauna, ecology, and evolution, experience in fieldwork and a driving licence are required.

References:

[1] Guidetti R. et al. (2024) Tardigrade diversity and community composition across Norwegian boreal forests. Zoological Journal of the Linnean Society, 200(1): 156–171. [https://doi.org/10.1093/zoolinnean/zlad136]

[2] Guil N. & Sanchez-Moreno S. (2013) Fine-scale patterns in micrometazoans: tardigrade diversity, community composition and trophic dynamics in leaf litter. Systematics and Biodiversity, 11(2): 181–193. [https://doi.org/10.1080/14772000.2013.798370]